Rancho Products

Building on Rancho Biosciences' proven expertise in data curation, bioinformatics, and advanced analytics, we deliver transformative digital data solutions for the pharmaceutical and healthcare sectors.

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Data Crawler

Rancho’s Data Crawler lets users crawl, manage and enrich data and metadata from PubMed, ClinicalTrials.gov, and other commonly used public resources. “Light Crawler” and “Deep Crawler” modes are customizable to your project’s needs to provide an efficient yet comprehensive search experience.

Light Crawler

Lets users extract valuable information from their target publications. The Light Crawler can be used for:

  • Publication identification, coverage, and metadata
  • Data parsing and cleaning
  • Easy export
  • Scalability

Deep Crawler

Designed to gather sample-level metadata from publications. The Deep Crawler can be used for:

  • Searching for a wide variety of metadata, including (but not limited to) sample identification numbers, sample dates, sample processing methods, and experimental conditions
  • Comparing results across different studies and datasets

Features

  • Access to millions of research papers, specimens, and datasets
  • Annotation Service – automatically annotates keywords in free-text fields from both metadata and sample levels against public ontologies
  • Customizable to extract data from various websites; can be used on static and dynamic web pages.
  • Can extract data in different formats, including JSON, CSV, and Excel, for easy integration into various analytical tools and platforms.

TMS

Rancho BioSciences’ Terminology-Mapping Solution takes a two-pronged approach to ontologies: select the best ontologies to map to, then pre-index standard ontology terms for efficient mapping.

Ontology Store

A graph database allowing users to ingest standard and custom ontologies and perform basic ontology operations, such as text annotation, common ancestor, and level alignment.

Mapping Suggestor

The Ontology Mapping Suggester Tool suggests the best ontologies to use based on users’ existing text or term list.

UI Portal Application

A UI Front-end Application allows users to annotate terms directly from their browser, interfacing with TMS while enabling standard spreadsheet functions (for example: column mapping; range mapping; etc.).