Now Live. 8,000+ Curated Studies

Stop Wrangling Data
Start Discovering Biology

OmicsHQ^™ brings together expertly curated, standardized single-cell omics datasets from across the complete scientific ecosystem. Analysis-ready, with consistent metadata.

What's included in your trial

Full catalog access

UMAP & PCA visualization

Harmonized metadata

Preview curated datasets

OmicsHQ Single-Cell Catalog with UMAP Visualizer

See It In Action

From Data to Insight in Minutes

Watch how research teams go from search to analysis-ready data, without a single line of preprocessing code.

The Challenge

Fragmented Omics Data Is
Slowing Down Discovery

80%

of a scientist's time is spent searching, cleaning, and organizing data

While vast public datasets of single-cell data exist that can be used to further research, these public datasets are fragmented across repositories, inconsistently processed, and difficult to compare.

The Solution

Depth, Quality and Structure

We've assembled and harmonized an expansive collection
of single-cell datasets.

Annotated Single Cells

103M+

Across 1,029 pre-processed datasets, standardized and ready to use.

8,273

Study Records

Across 46 public repositories

1,846

Diseases Covered

Standardized disease ontologies

1,649

Tissues Covered

Aligned to UBERON ontology

1,291

Cell Types

Annotated and harmonized

Catalog numbers reflect current scope and grow continuously as new datasets are curated.

The Catalog

A Unified Catalog of Analysis-Ready Omics Datasets

OmicsHQ^™ replaces fragmented data sources with curated, standardized datasets that can be used immediately by data scientists, AI engineers, and researchers.

Standardized, AI-Ready Metadata

Metadata is harmonized and aligned to ontologies at the study, donor, sample, and disease levels so it works out of the box for ML and downstream analysis.

Evaluate Before Download

Preview UMAPs, PCA embeddings, and dataset characteristics so you can decide if the data fits before you pull it.

Perpetual Ownership, No Lock-In

Once you download a dataset, you own it in perpetuity. No recurring subscription for data usage, no ongoing dependency on the platform.

Request New Datasets On Demand

Need a dataset that isn't in the catalog yet? Request it directly in-platform and have it delivered as standardized, ready-to-use data.

14-Day Free Trial Included

From Fragmented Data to Analysis-Ready Datasets

Remove manual data prep and shorten time to analysis.

Without OmicsHQ

With OmicsHQ

Multiple, messy repositories

One unified catalog

Inconsistent, raw data

Standardized, curated datasets

Manual filtering through papers

Structured search with harmonized metadata

Difficult to compare across studies

Consistent metadata for easy comparison

Download blind, discover problems later

Evaluate with UMAP before committing

Weeks of preprocessing

Ready-to-use data on download

DIY processing, dataset by dataset

Processing handled. Up to 80% faster

Expert Curation

Every Dataset Is Curated, Standardized, and Validated

Each dataset goes through a structured process before it is added to the catalog.

Pre-Screening

Datasets are evaluated for relevance and quality before inclusion. Datasets that can't meet the bar are excluded.

Standardize & Harmonize

Metadata aligned to consistent ontologies across study, donor, sample, and disease levels.

Bioinformatics Processing

Processed through a reproducible, validated pipeline to ensure consistency. Same inputs, same method, every time.

Independent Quality Review

Each dataset independently quality-checked for accuracy and consistency before publication to the catalog.

Delivered Ready-to-Use

Structured and standardized for immediate use in analysis and AI workflows. No additional prep required.

★★★★★

"This is my first stop to browse data."

Head of Precision Analytics, Top 20 Pharma

Up to 80% reduction in data curation time

Ready to Stop Wrangling and Start Discovering?

Your next dataset is already curated, standardized, and waiting.

14-Day Free Trial included with every new account

Frequently Asked Questions

Everything You Need to Know Before You Start

Can't find what you're looking for? Talk to our team.

Your 14-day free trial allows you to browse the standardized OmicsHQ^™ catalog of single-cell RNA-seq studies and datasets. Datasets can be explored using UMAP or PCA embeddings, gene expression, and curated metadata.

No coding or bioinformatics expertise is required to use OmicsHQ^™. Studies can easily be searched, filtered, and visualized through an intuitive interface.

Licensed users can purchase and download datasets in ready-to-use formats such as Seurat and H5AD.

OmicsHQ^™ is the comprehensive catalog of single-cell RNA-seq datasets from a vast array of public sources. Unlike open source portals, OmicsHQ^™ provides standardized, ready-to-use data that can be used to construct atlases or conduct cross-study analysis.

Team licenses to OmicsHQ^™ are available. Contact our team for information on teams or bulk licensing options.

Any datasets purchased through OmicsHQ^™ may continue to be used after your subscription ends, provided they were downloaded prior to subscription expiration. Purchased datasets include a perpetual, non-exclusive, non-transferable license.

Licensed users can download datasets from the catalog using purchased Credits. Contact our team to purchase download Credits.

Licensed users can request new datasets for curation. Curation requests are not available in the 14-day free trial — contact our team for specific requests during your trial.

OmicsHQ^™ standardizes key single-cell RNA-seq metadata fields such as disease, tissue, cell type, treatment, and study attributes using controlled vocabularies and ontologies (e.g., DOID, UBERON, and EFO). This supports metadata consistency, FAIR data practices, dataset harmonization, and reliable cross-study analysis.

OmicsHQ^™ currently focuses on single-cell RNA-seq datasets, with plans to expand support for additional omics and multi-modal data types in future releases.

Yes. OmicsHQ^™ datasets are standardized and analysis-ready, making them well-suited for downstream bioinformatics, AI/ML model development, and data-driven discovery workflows.

OmicsHQ^™ includes thousands of pre-processed, harmonized datasets ready for downstream analysis. Additional studies can be requested for processing and curation through the platform.